miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Nasonia vitripennis
,
Nasonia giraulti
ABOUT THIS RECORD
ID:
MNEST037587
species:
Nasonia giraulti
miRNA family:
mir-276
source:
miRBase, original name:
ngi-mir-276
(
MI0016647
)
Taxonomy by NCBI:
Nasonia giraulti
Nasonia
Pteromalinae
Pteromalidae
Chalcidoidea
Chaldicoidea group
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGGAACTTCATACCGTGCTCT
miRNA*
AGCGAGGTATAGAGTTCCTACG
mismatches:
4
bulges:
0
View larger
pre-miRNA
TGGTAGAGATCCAGC
AGCGAGGTATAGAGTTCCTACG
TAGATTTCAGAAAG
TAGGAACTTCATACCGTGCTCT
TGGACTTGCCG
dot-bracket secondary structure
.((((.((.(((((.
((((.(((((..(((((((((.
.............)
))))))))..))))).)))).)
)))))))))).
SIMILARITIES
miRBase
nvi-mir-276
:
2e-42
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-276: 3e-41
Identical with:
nvi-mir-276
from miRBase (
MNEST037660
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Sathyamurthy G, Swamy NR,
Int J Insect Sci. 2:1-13(2010).
,
"Computational Identification and Characterization of Putative miRNAs in Nasonia Species"